Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
IRX4P78413 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
IRX4P78413 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
IRX4P78413 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.53■□□□□ 0.08
IRX4P78413 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.53■□□□□ 0.08
IRX4P78413 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.53■□□□□ 0.08
IRX4P78413 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
IRX4P78413 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.53■□□□□ 0.08
IRX4P78413 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.53■□□□□ 0.08
IRX4P78413 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
IRX4P78413 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.53■□□□□ 0.08
IRX4P78413 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IRX4P78413 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IRX4P78413 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IRX4P78413 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IRX4P78413 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IRX4P78413 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
IRX4P78413 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
IRX4P78413 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
IRX4P78413 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.52■□□□□ 0.08
IRX4P78413 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.52■□□□□ 0.08
IRX4P78413 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IRX4P78413 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IRX4P78413 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
IRX4P78413 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IRX4P78413 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
IRX4P78413 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.52■□□□□ 0.08
IRX4P78413 CNN2P8-201ENST00000421872 913 ntBASIC15.52■□□□□ 0.08
IRX4P78413 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.52■□□□□ 0.08
IRX4P78413 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.52■□□□□ 0.08
IRX4P78413 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.52■□□□□ 0.08
IRX4P78413 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.52■□□□□ 0.08
IRX4P78413 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.52■□□□□ 0.08
IRX4P78413 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.52■□□□□ 0.08
IRX4P78413 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IRX4P78413 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.52■□□□□ 0.08
IRX4P78413 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.52■□□□□ 0.08
IRX4P78413 GNRHR2-203ENST00000581100 1187 ntBASIC15.52■□□□□ 0.08
IRX4P78413 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.52■□□□□ 0.08
IRX4P78413 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.08
IRX4P78413 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.52■□□□□ 0.08
IRX4P78413 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.52■□□□□ 0.07
IRX4P78413 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.52■□□□□ 0.07
IRX4P78413 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.52■□□□□ 0.07
IRX4P78413 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
IRX4P78413 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
IRX4P78413 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.52■□□□□ 0.07
IRX4P78413 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
IRX4P78413 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IRX4P78413 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
IRX4P78413 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IRX4P78413 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.52■□□□□ 0.07
IRX4P78413 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.52■□□□□ 0.07
IRX4P78413 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
IRX4P78413 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
IRX4P78413 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IRX4P78413 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IRX4P78413 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.51■□□□□ 0.07
IRX4P78413 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 AC140479.7-201ENST00000636301 2332 ntBASIC15.51■□□□□ 0.07
IRX4P78413 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.51■□□□□ 0.07
IRX4P78413 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.51■□□□□ 0.07
IRX4P78413 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.51■□□□□ 0.07
IRX4P78413 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
IRX4P78413 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.51■□□□□ 0.07
IRX4P78413 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.51■□□□□ 0.07
IRX4P78413 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.51■□□□□ 0.07
IRX4P78413 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.51■□□□□ 0.07
IRX4P78413 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
IRX4P78413 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms