Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.67■□□□□ 0.26
CCNA1P78396 AC092638.2-201ENST00000441105 947 ntBASIC16.67■□□□□ 0.26
CCNA1P78396 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCNA1P78396 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 SSR4P1-203ENST00000599569 2260 ntBASIC16.67■□□□□ 0.26
CCNA1P78396 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCNA1P78396 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.66■□□□□ 0.26
CCNA1P78396 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CCNA1P78396 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CCNA1P78396 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 KRT17P5-201ENST00000332088 839 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCNA1P78396 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.66■□□□□ 0.26
CCNA1P78396 HIST2H2BA-201ENST00000412169 381 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 AL627389.1-201ENST00000413508 1182 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 AC097065.1-201ENST00000425737 517 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.66■□□□□ 0.26
CCNA1P78396 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.66■□□□□ 0.26
CCNA1P78396 ST13P19-201ENST00000442505 1124 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.66■□□□□ 0.26
CCNA1P78396 PIN4P1-201ENST00000451079 396 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.66■□□□□ 0.26
CCNA1P78396 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCNA1P78396 KRT8P1-201ENST00000557533 1207 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.66■□□□□ 0.26
CCNA1P78396 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 AC107464.3-201ENST00000609172 737 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 AC025262.2-201ENST00000623975 1056 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 AL161773.1-201ENST00000624845 863 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 AL132780.4-201ENST00000624870 1135 ntBASIC16.66■□□□□ 0.26
CCNA1P78396 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.66■□□□□ 0.26
CCNA1P78396 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCNA1P78396 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.66■□□□□ 0.26
CCNA1P78396 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.66■□□□□ 0.26
CCNA1P78396 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCNA1P78396 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.66■□□□□ 0.26
CCNA1P78396 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCNA1P78396 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.65■□□□□ 0.26
CCNA1P78396 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNA1P78396 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCNA1P78396 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCNA1P78396 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNA1P78396 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.65■□□□□ 0.26
CCNA1P78396 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCNA1P78396 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCNA1P78396 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 HLA-DMA-203ENST00000395305 777 ntBASIC16.65■□□□□ 0.26
CCNA1P78396 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.65■□□□□ 0.26
CCNA1P78396 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.65■□□□□ 0.26
CCNA1P78396 MRPL22P1-201ENST00000505398 616 ntBASIC16.65■□□□□ 0.26
CCNA1P78396 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.65■□□□□ 0.26
CCNA1P78396 AC138701.2-201ENST00000553634 226 ntBASIC16.65■□□□□ 0.26
CCNA1P78396 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 RN7SL470P-201ENST00000583069 259 ntBASIC16.65■□□□□ 0.26
CCNA1P78396 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCNA1P78396 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCNA1P78396 AL591471.1-201ENST00000621855 229 ntBASIC16.65■□□□□ 0.26
CCNA1P78396 AC073911.3-201ENST00000624401 631 ntBASIC16.65■□□□□ 0.26
CCNA1P78396 AC005618.3-201ENST00000624928 458 ntBASIC16.65■□□□□ 0.26
CCNA1P78396 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.65■□□□□ 0.26
CCNA1P78396 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNA1P78396 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms