Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.3■□□□□ 0.36
PPP4CP60510 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PPP4CP60510 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.3■□□□□ 0.36
PPP4CP60510 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PPP4CP60510 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.3■□□□□ 0.36
PPP4CP60510 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.3■□□□□ 0.36
PPP4CP60510 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.3■□□□□ 0.36
PPP4CP60510 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 DUX4L50-201ENST00000455245 715 ntBASIC17.3■□□□□ 0.36
PPP4CP60510 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
PPP4CP60510 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.3■□□□□ 0.36
PPP4CP60510 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.3■□□□□ 0.36
PPP4CP60510 AC093752.3-201ENST00000567343 901 ntBASIC17.3■□□□□ 0.36
PPP4CP60510 MIR4706-201ENST00000582134 82 ntBASIC17.3■□□□□ 0.36
PPP4CP60510 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.3■□□□□ 0.36
PPP4CP60510 AC009560.1-201ENST00000620208 434 ntBASIC17.3■□□□□ 0.36
PPP4CP60510 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PPP4CP60510 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PPP4CP60510 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.3■□□□□ 0.36
PPP4CP60510 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PPP4CP60510 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.3■□□□□ 0.36
PPP4CP60510 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPP4CP60510 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PPP4CP60510 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PPP4CP60510 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PPP4CP60510 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.29■□□□□ 0.36
PPP4CP60510 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 MIR557-201ENST00000385239 98 ntBASIC17.29■□□□□ 0.36
PPP4CP60510 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PPP4CP60510 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.29■□□□□ 0.36
PPP4CP60510 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.29■□□□□ 0.36
PPP4CP60510 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.29■□□□□ 0.36
PPP4CP60510 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.29■□□□□ 0.36
PPP4CP60510 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.29■□□□□ 0.36
PPP4CP60510 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PPP4CP60510 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PPP4CP60510 MIR4722-201ENST00000578292 60 ntBASIC17.29■□□□□ 0.36
PPP4CP60510 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.29■□□□□ 0.36
PPP4CP60510 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.29■□□□□ 0.36
PPP4CP60510 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.29■□□□□ 0.36
PPP4CP60510 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 AC021016.3-201ENST00000608367 477 ntBASIC17.29■□□□□ 0.36
PPP4CP60510 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC17.29■□□□□ 0.36
PPP4CP60510 AC007718.1-201ENST00000621078 280 ntBASIC17.29■□□□□ 0.36
PPP4CP60510 AC051619.9-201ENST00000623237 597 ntBASIC17.29■□□□□ 0.36
PPP4CP60510 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 LAP3P2-201ENST00000454686 1454 ntBASIC17.29■□□□□ 0.36
PPP4CP60510 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PPP4CP60510 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.29■□□□□ 0.36
PPP4CP60510 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PPP4CP60510 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4CP60510 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4CP60510 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PPP4CP60510 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4CP60510 CAP2P1-201ENST00000557743 1390 ntBASIC17.28■□□□□ 0.36
PPP4CP60510 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4CP60510 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4CP60510 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PPP4CP60510 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4CP60510 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4CP60510 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms