Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.69■□□□□ 0.1
MCCD1P59942 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
MCCD1P59942 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MCCD1P59942 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 AC007952.5-201ENST00000572818 1486 ntBASIC15.69■□□□□ 0.1
MCCD1P59942 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.69■□□□□ 0.1
MCCD1P59942 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 AC011474.4-201ENST00000623523 2076 ntBASIC15.69■□□□□ 0.1
MCCD1P59942 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MCCD1P59942 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MCCD1P59942 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MCCD1P59942 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
MCCD1P59942 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MCCD1P59942 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.68■□□□□ 0.1
MCCD1P59942 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
MCCD1P59942 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.68■□□□□ 0.1
MCCD1P59942 OR2R1P-201ENST00000441404 914 ntBASIC15.68■□□□□ 0.1
MCCD1P59942 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MCCD1P59942 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.68■□□□□ 0.1
MCCD1P59942 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 SCARNA21-201ENST00000517026 139 ntBASIC15.68■□□□□ 0.1
MCCD1P59942 FAM8A2P-201ENST00000528813 1142 ntBASIC15.68■□□□□ 0.1
MCCD1P59942 PGAM1P5-201ENST00000548011 764 ntBASIC15.68■□□□□ 0.1
MCCD1P59942 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
MCCD1P59942 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.68■□□□□ 0.1
MCCD1P59942 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.68■□□□□ 0.1
MCCD1P59942 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.68■□□□□ 0.1
MCCD1P59942 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.68■□□□□ 0.1
MCCD1P59942 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 AC007686.3-201ENST00000619017 3487 ntBASIC15.68■□□□□ 0.1
MCCD1P59942 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 BEND3P1-201ENST00000421591 1944 ntBASIC15.68■□□□□ 0.1
MCCD1P59942 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 AL359881.3-201ENST00000602640 1721 ntBASIC15.68■□□□□ 0.1
MCCD1P59942 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.68■□□□□ 0.1
MCCD1P59942 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MCCD1P59942 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.68■□□□□ 0.1
MCCD1P59942 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
MCCD1P59942 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MCCD1P59942 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
MCCD1P59942 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
MCCD1P59942 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.67■□□□□ 0.1
MCCD1P59942 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
MCCD1P59942 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.67■□□□□ 0.1
MCCD1P59942 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
MCCD1P59942 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MCCD1P59942 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms