Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CACNB3P54284 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CACNB3P54284 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.36■□□□□ 0.37
CACNB3P54284 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.36■□□□□ 0.37
CACNB3P54284 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 AL627422.1-201ENST00000434104 580 ntBASIC17.36■□□□□ 0.37
CACNB3P54284 DUTP3-201ENST00000450025 415 ntBASIC17.36■□□□□ 0.37
CACNB3P54284 DUX4L50-201ENST00000455245 715 ntBASIC17.36■□□□□ 0.37
CACNB3P54284 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 AC093752.3-201ENST00000567343 901 ntBASIC17.36■□□□□ 0.37
CACNB3P54284 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.36■□□□□ 0.37
CACNB3P54284 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CACNB3P54284 AHCYP4-201ENST00000419201 1315 ntBASIC17.36■□□□□ 0.37
CACNB3P54284 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.36■□□□□ 0.37
CACNB3P54284 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 AC009093.10-201ENST00000641956 1442 ntBASIC17.36■□□□□ 0.37
CACNB3P54284 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CACNB3P54284 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.36■□□□□ 0.37
CACNB3P54284 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.35■□□□□ 0.37
CACNB3P54284 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CACNB3P54284 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.35■□□□□ 0.37
CACNB3P54284 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.35■□□□□ 0.37
CACNB3P54284 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CACNB3P54284 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CACNB3P54284 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.35■□□□□ 0.37
CACNB3P54284 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 AC084781.1-201ENST00000613737 656 ntBASIC17.35■□□□□ 0.37
CACNB3P54284 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.35■□□□□ 0.37
CACNB3P54284 AC009084.3-201ENST00000623356 437 ntBASIC17.35■□□□□ 0.37
CACNB3P54284 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.35■□□□□ 0.37
CACNB3P54284 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNB3P54284 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNB3P54284 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CACNB3P54284 AP002414.2-201ENST00000591780 3365 ntBASIC17.34■□□□□ 0.37
CACNB3P54284 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.34■□□□□ 0.37
CACNB3P54284 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CACNB3P54284 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNB3P54284 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms