Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.28□□□□□ -0.28
GBX2P52951 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.28□□□□□ -0.28
GBX2P52951 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.28□□□□□ -0.28
GBX2P52951 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.28□□□□□ -0.28
GBX2P52951 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.28□□□□□ -0.28
GBX2P52951 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.28□□□□□ -0.28
GBX2P52951 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.28□□□□□ -0.28
GBX2P52951 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
GBX2P52951 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GBX2P52951 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 TUBB3P1-201ENST00000405796 1332 ntBASIC13.28□□□□□ -0.28
GBX2P52951 AC093525.8-201ENST00000624099 1342 ntBASIC13.28□□□□□ -0.28
GBX2P52951 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GBX2P52951 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
GBX2P52951 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.28□□□□□ -0.28
GBX2P52951 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.28□□□□□ -0.28
GBX2P52951 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.28□□□□□ -0.28
GBX2P52951 AL158070.2-201ENST00000623713 1621 ntBASIC13.28□□□□□ -0.28
GBX2P52951 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GBX2P52951 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.27□□□□□ -0.28
GBX2P52951 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GBX2P52951 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GBX2P52951 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.27□□□□□ -0.28
GBX2P52951 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
GBX2P52951 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.27□□□□□ -0.28
GBX2P52951 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GBX2P52951 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
GBX2P52951 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
GBX2P52951 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
GBX2P52951 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GBX2P52951 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
GBX2P52951 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GBX2P52951 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.27□□□□□ -0.29
GBX2P52951 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.27□□□□□ -0.29
GBX2P52951 GAPDHP40-201ENST00000505218 1006 ntBASIC13.27□□□□□ -0.29
GBX2P52951 AC069262.1-201ENST00000539058 672 ntBASIC13.27□□□□□ -0.29
GBX2P52951 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GBX2P52951 MIR3687-2-201ENST00000577708 61 ntBASIC13.27□□□□□ -0.29
GBX2P52951 MIR3687-1-201ENST00000614492 61 ntBASIC13.27□□□□□ -0.29
GBX2P52951 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.27□□□□□ -0.29
GBX2P52951 SPDYE12P-201ENST00000618416 771 ntBASIC13.27□□□□□ -0.29
GBX2P52951 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.27□□□□□ -0.29
GBX2P52951 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.27□□□□□ -0.29
GBX2P52951 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
GBX2P52951 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.27□□□□□ -0.29
GBX2P52951 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GBX2P52951 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.27□□□□□ -0.29
GBX2P52951 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GBX2P52951 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
GBX2P52951 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GBX2P52951 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
GBX2P52951 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GBX2P52951 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms