Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 RN7SL832P-201ENST00000607781 1756 ntBASIC17.93■□□□□ 0.46
NUP98P52948 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 LINC00115-201ENST00000473798 1317 ntBASIC17.93■□□□□ 0.46
NUP98P52948 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NUP98P52948 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NUP98P52948 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.93■□□□□ 0.46
NUP98P52948 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.93■□□□□ 0.46
NUP98P52948 MIR4472-1-201ENST00000584349 80 ntBASIC17.93■□□□□ 0.46
NUP98P52948 AC010976.2-201ENST00000609697 852 ntBASIC17.93■□□□□ 0.46
NUP98P52948 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.93■□□□□ 0.46
NUP98P52948 FGD5P1-202ENST00000614866 2498 ntBASIC17.93■□□□□ 0.46
NUP98P52948 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NUP98P52948 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
NUP98P52948 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.93■□□□□ 0.46
NUP98P52948 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP98P52948 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP98P52948 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP98P52948 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP98P52948 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP98P52948 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NUP98P52948 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP98P52948 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP98P52948 PSMD4P1-201ENST00000433951 1109 ntBASIC17.92■□□□□ 0.46
NUP98P52948 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.92■□□□□ 0.46
NUP98P52948 STK24P1-201ENST00000455035 1291 ntBASIC17.92■□□□□ 0.46
NUP98P52948 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NUP98P52948 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.92■□□□□ 0.46
NUP98P52948 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP98P52948 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP98P52948 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP98P52948 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.92■□□□□ 0.46
NUP98P52948 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.92■□□□□ 0.46
NUP98P52948 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP98P52948 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP98P52948 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.92■□□□□ 0.46
NUP98P52948 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NUP98P52948 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NUP98P52948 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP98P52948 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP98P52948 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.91■□□□□ 0.46
NUP98P52948 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NUP98P52948 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.91■□□□□ 0.46
NUP98P52948 BX679664.3-201ENST00000414070 555 ntBASIC17.91■□□□□ 0.46
NUP98P52948 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.91■□□□□ 0.46
NUP98P52948 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NUP98P52948 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.91■□□□□ 0.46
NUP98P52948 RN7SL396P-201ENST00000471086 295 ntBASIC17.91■□□□□ 0.46
NUP98P52948 AC113935.1-201ENST00000471722 555 ntBASIC17.91■□□□□ 0.46
NUP98P52948 RN7SL818P-201ENST00000485099 259 ntBASIC17.91■□□□□ 0.46
NUP98P52948 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.91■□□□□ 0.46
NUP98P52948 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.91■□□□□ 0.46
NUP98P52948 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.91■□□□□ 0.46
NUP98P52948 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.91■□□□□ 0.46
NUP98P52948 AC005357.2-202ENST00000590507 1060 ntBASIC17.91■□□□□ 0.46
NUP98P52948 RN7SL725P-201ENST00000606439 259 ntBASIC17.91■□□□□ 0.46
NUP98P52948 AC006158.1-201ENST00000610661 249 ntBASIC17.91■□□□□ 0.46
NUP98P52948 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.91■□□□□ 0.46
NUP98P52948 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
NUP98P52948 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NUP98P52948 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.91■□□□□ 0.46
NUP98P52948 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.91■□□□□ 0.46
NUP98P52948 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.91■□□□□ 0.46
NUP98P52948 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NUP98P52948 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP98P52948 PGAM1P12-201ENST00000505622 748 ntBASIC17.91■□□□□ 0.46
NUP98P52948 RN7SL357P-201ENST00000581065 298 ntBASIC17.91■□□□□ 0.46
NUP98P52948 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.91■□□□□ 0.46
NUP98P52948 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
NUP98P52948 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NUP98P52948 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
NUP98P52948 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms