Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
HMGCLP35914 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 E2F3P2-201ENST00000447755 1422 ntBASIC14.7□□□□□ -0.06
HMGCLP35914 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.7□□□□□ -0.06
HMGCLP35914 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 RPS2P32-201ENST00000439199 892 ntBASIC14.7□□□□□ -0.06
HMGCLP35914 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.7□□□□□ -0.06
HMGCLP35914 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.7□□□□□ -0.06
HMGCLP35914 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.7□□□□□ -0.06
HMGCLP35914 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.7□□□□□ -0.06
HMGCLP35914 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HMGCLP35914 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HMGCLP35914 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HMGCLP35914 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HMGCLP35914 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 AL161772.1-201ENST00000610494 4412 ntBASIC14.69□□□□□ -0.06
HMGCLP35914 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HMGCLP35914 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.69□□□□□ -0.06
HMGCLP35914 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
HMGCLP35914 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGCLP35914 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGCLP35914 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 AC104581.4-201ENST00000623126 3052 ntBASIC14.69□□□□□ -0.06
HMGCLP35914 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGCLP35914 AL354877.1-201ENST00000424412 413 ntBASIC14.69□□□□□ -0.06
HMGCLP35914 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGCLP35914 FAM58BP-201ENST00000439056 645 ntBASIC14.69□□□□□ -0.06
HMGCLP35914 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGCLP35914 RPSAP36-202ENST00000494591 1261 ntBASIC14.69□□□□□ -0.06
HMGCLP35914 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGCLP35914 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.69□□□□□ -0.06
HMGCLP35914 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.69□□□□□ -0.06
HMGCLP35914 AL008721.1-201ENST00000609964 604 ntBASIC14.69□□□□□ -0.06
HMGCLP35914 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.69□□□□□ -0.06
HMGCLP35914 MIR6752-201ENST00000618442 71 ntBASIC14.69□□□□□ -0.06
HMGCLP35914 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HMGCLP35914 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGCLP35914 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCLP35914 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HMGCLP35914 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGCLP35914 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGCLP35914 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCLP35914 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCLP35914 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGCLP35914 MTX1P1-201ENST00000440904 838 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms