Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDC27P30260 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC27P30260 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC27P30260 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDC27P30260 KLF2P1-201ENST00000447438 1042 ntBASIC17.11■□□□□ 0.33
CDC27P30260 RNA5SP412-201ENST00000516234 123 ntBASIC17.11■□□□□ 0.33
CDC27P30260 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CDC27P30260 DUX4L46-201ENST00000566845 751 ntBASIC17.11■□□□□ 0.33
CDC27P30260 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC27P30260 AC132192.2-201ENST00000596206 1147 ntBASIC17.11■□□□□ 0.33
CDC27P30260 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.11■□□□□ 0.33
CDC27P30260 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CDC27P30260 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC27P30260 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC27P30260 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC27P30260 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC27P30260 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC27P30260 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDC27P30260 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC27P30260 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC27P30260 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC27P30260 NFIC-211ENST00000641145 8399 ntBASIC17.11■□□□□ 0.33
CDC27P30260 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC27P30260 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDC27P30260 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC27P30260 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC27P30260 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 CICP16-201ENST00000502609 2813 ntBASIC17.1■□□□□ 0.33
CDC27P30260 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.1■□□□□ 0.33
CDC27P30260 RPL13AP20-201ENST00000459725 609 ntBASIC17.1■□□□□ 0.33
CDC27P30260 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC27P30260 RPSAP36-202ENST00000494591 1261 ntBASIC17.1■□□□□ 0.33
CDC27P30260 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.1■□□□□ 0.33
CDC27P30260 EEF1DP1-201ENST00000585891 896 ntBASIC17.1■□□□□ 0.33
CDC27P30260 AC010328.2-201ENST00000597698 1111 ntBASIC17.1■□□□□ 0.33
CDC27P30260 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDC27P30260 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CDC27P30260 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC27P30260 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC27P30260 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC27P30260 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDC27P30260 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC27P30260 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC27P30260 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDC27P30260 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDC27P30260 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC27P30260 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDC27P30260 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC27P30260 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC27P30260 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.09■□□□□ 0.33
CDC27P30260 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.09■□□□□ 0.33
CDC27P30260 FAM21FP-201ENST00000426241 1131 ntBASIC17.09■□□□□ 0.33
CDC27P30260 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDC27P30260 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.09■□□□□ 0.33
CDC27P30260 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDC27P30260 SORD2P-201ENST00000558556 1069 ntBASIC17.09■□□□□ 0.33
CDC27P30260 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.09■□□□□ 0.33
CDC27P30260 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDC27P30260 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.09■□□□□ 0.33
CDC27P30260 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.09■□□□□ 0.33
CDC27P30260 AC244157.2-201ENST00000616239 1006 ntBASIC17.09■□□□□ 0.33
CDC27P30260 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC27P30260 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDC27P30260 TMBIM7P-202ENST00000641474 1516 ntBASIC17.09■□□□□ 0.33
CDC27P30260 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 AC244394.1-201ENST00000435000 1665 ntBASIC17.09■□□□□ 0.33
CDC27P30260 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC27P30260 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC27P30260 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms