Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TNFSF4P23510 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TNFSF4P23510 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TNFSF4P23510 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 HLA-V-201ENST00000429037 534 ntBASIC12.73□□□□□ -0.37
TNFSF4P23510 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.73□□□□□ -0.37
TNFSF4P23510 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.73□□□□□ -0.37
TNFSF4P23510 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.73□□□□□ -0.37
TNFSF4P23510 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.73□□□□□ -0.37
TNFSF4P23510 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 AC010328.2-201ENST00000597698 1111 ntBASIC12.73□□□□□ -0.37
TNFSF4P23510 ZACNP1-201ENST00000612259 710 ntBASIC12.73□□□□□ -0.37
TNFSF4P23510 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.73□□□□□ -0.37
TNFSF4P23510 MIR6752-201ENST00000618442 71 ntBASIC12.73□□□□□ -0.37
TNFSF4P23510 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TNFSF4P23510 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TNFSF4P23510 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFSF4P23510 AC023090.2-201ENST00000625182 2110 ntBASIC12.73□□□□□ -0.37
TNFSF4P23510 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
TNFSF4P23510 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.73□□□□□ -0.37
TNFSF4P23510 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFSF4P23510 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TNFSF4P23510 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFSF4P23510 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFSF4P23510 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
TNFSF4P23510 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TNFSF4P23510 AL355994.2-201ENST00000447882 704 ntBASIC12.72□□□□□ -0.37
TNFSF4P23510 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFSF4P23510 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.72□□□□□ -0.37
TNFSF4P23510 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 SNX29P1-201ENST00000548357 1007 ntBASIC12.72□□□□□ -0.37
TNFSF4P23510 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms