Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 RN7SKP230-201ENST00000365642 335 ntBASIC14.97□□□□□ -0.01
XPAP23025 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.97□□□□□ -0.01
XPAP23025 CHMP1AP1-201ENST00000445563 662 ntBASIC14.97□□□□□ -0.01
XPAP23025 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.97□□□□□ -0.01
XPAP23025 RPSAP36-202ENST00000494591 1261 ntBASIC14.97□□□□□ -0.01
XPAP23025 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.97□□□□□ -0.01
XPAP23025 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.97□□□□□ -0.01
XPAP23025 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.97□□□□□ -0.01
XPAP23025 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 AC243960.2-201ENST00000600996 747 ntBASIC14.97□□□□□ -0.01
XPAP23025 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
XPAP23025 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.97□□□□□ -0.01
XPAP23025 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
XPAP23025 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.96□□□□□ -0.01
XPAP23025 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.96□□□□□ -0.01
XPAP23025 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.96□□□□□ -0.01
XPAP23025 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 AC104306.2-201ENST00000451877 341 ntBASIC14.96□□□□□ -0.01
XPAP23025 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 AC108725.1-201ENST00000495472 409 ntBASIC14.96□□□□□ -0.01
XPAP23025 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 FAM8A2P-201ENST00000528813 1142 ntBASIC14.96□□□□□ -0.01
XPAP23025 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.96□□□□□ -0.01
XPAP23025 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.96□□□□□ -0.01
XPAP23025 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
XPAP23025 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 AL118558.3-201ENST00000607414 1079 ntBASIC14.96□□□□□ -0.01
XPAP23025 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.96□□□□□ -0.01
XPAP23025 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
XPAP23025 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
XPAP23025 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XPAP23025 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.96□□□□□ -0.01
XPAP23025 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
XPAP23025 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
XPAP23025 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.96□□□□□ -0.02
XPAP23025 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
XPAP23025 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.96□□□□□ -0.02
XPAP23025 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
XPAP23025 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
XPAP23025 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
XPAP23025 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.96□□□□□ -0.02
XPAP23025 AC009093.2-202ENST00000620513 2079 ntBASIC14.96□□□□□ -0.02
XPAP23025 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
XPAP23025 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
XPAP23025 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
XPAP23025 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
XPAP23025 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
XPAP23025 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms