Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.44□□□□□ -0.58
RAB4AP20338 MXRA5Y-201ENST00000420610 8000 ntBASIC11.44□□□□□ -0.58
RAB4AP20338 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.44□□□□□ -0.58
RAB4AP20338 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.44□□□□□ -0.58
RAB4AP20338 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.43□□□□□ -0.58
RAB4AP20338 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC11.43□□□□□ -0.58
RAB4AP20338 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RAB4AP20338 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.43□□□□□ -0.58
RAB4AP20338 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RAB4AP20338 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
RAB4AP20338 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.43□□□□□ -0.58
RAB4AP20338 AL513480.1-201ENST00000451731 511 ntBASIC11.43□□□□□ -0.58
RAB4AP20338 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 AC109635.5-201ENST00000533593 962 ntBASIC11.43□□□□□ -0.58
RAB4AP20338 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.43□□□□□ -0.58
RAB4AP20338 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.43□□□□□ -0.58
RAB4AP20338 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.43□□□□□ -0.58
RAB4AP20338 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.43□□□□□ -0.58
RAB4AP20338 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.43□□□□□ -0.58
RAB4AP20338 MIR1199-201ENST00000621445 119 ntBASIC11.43□□□□□ -0.58
RAB4AP20338 AC004790.2-201ENST00000623588 572 ntBASIC11.43□□□□□ -0.58
RAB4AP20338 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.43□□□□□ -0.58
RAB4AP20338 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RAB4AP20338 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.43□□□□□ -0.58
RAB4AP20338 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
RAB4AP20338 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RAB4AP20338 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
RAB4AP20338 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB4AP20338 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB4AP20338 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
RAB4AP20338 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
RAB4AP20338 AP001267.2-201ENST00000532619 2086 ntBASIC11.42□□□□□ -0.58
RAB4AP20338 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms