Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.05□□□□□ -0.16
NCK1P16333 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 HSPA8P5-201ENST00000456928 2069 ntBASIC14.05□□□□□ -0.16
NCK1P16333 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.05□□□□□ -0.16
NCK1P16333 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.05□□□□□ -0.16
NCK1P16333 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.05□□□□□ -0.16
NCK1P16333 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NCK1P16333 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.05□□□□□ -0.16
NCK1P16333 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.05□□□□□ -0.16
NCK1P16333 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.05□□□□□ -0.16
NCK1P16333 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.05□□□□□ -0.16
NCK1P16333 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.05□□□□□ -0.16
NCK1P16333 AC069262.1-201ENST00000539058 672 ntBASIC14.05□□□□□ -0.16
NCK1P16333 TIMM17BP1-201ENST00000545713 516 ntBASIC14.05□□□□□ -0.16
NCK1P16333 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NCK1P16333 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NCK1P16333 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.05□□□□□ -0.16
NCK1P16333 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.05□□□□□ -0.16
NCK1P16333 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
NCK1P16333 MIR497HG-202ENST00000572453 3838 ntBASIC14.05□□□□□ -0.16
NCK1P16333 AC015818.8-201ENST00000587907 1519 ntBASIC14.05□□□□□ -0.16
NCK1P16333 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NCK1P16333 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.05□□□□□ -0.16
NCK1P16333 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NCK1P16333 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.05□□□□□ -0.16
NCK1P16333 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 AL138799.1-201ENST00000448213 1675 ntBASIC14.04□□□□□ -0.16
NCK1P16333 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NCK1P16333 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.04□□□□□ -0.16
NCK1P16333 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 DNAJB3-201ENST00000446806 729 ntBASIC14.04□□□□□ -0.16
NCK1P16333 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 AL512356.2-201ENST00000546955 174 ntBASIC14.04□□□□□ -0.16
NCK1P16333 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
NCK1P16333 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.04□□□□□ -0.16
NCK1P16333 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 AC107373.2-201ENST00000607735 490 ntBASIC14.04□□□□□ -0.16
NCK1P16333 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.04□□□□□ -0.16
NCK1P16333 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 DRD5P1-201ENST00000456605 1438 ntBASIC14.04□□□□□ -0.16
NCK1P16333 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.04□□□□□ -0.16
NCK1P16333 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NCK1P16333 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NCK1P16333 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.03□□□□□ -0.16
NCK1P16333 AL365181.3-201ENST00000605886 3222 ntBASIC14.03□□□□□ -0.16
NCK1P16333 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NCK1P16333 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NCK1P16333 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms