Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC005562.1-201ENST00000583030 3219 ntBASIC12.15□□□□□ -0.46
DEFA4P12838 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA4P12838 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA4P12838 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA4P12838 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA4P12838 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
DEFA4P12838 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA4P12838 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA4P12838 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA4P12838 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA4P12838 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.15□□□□□ -0.47
DEFA4P12838 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
DEFA4P12838 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.15□□□□□ -0.47
DEFA4P12838 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
DEFA4P12838 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
DEFA4P12838 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
DEFA4P12838 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA4P12838 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA4P12838 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
DEFA4P12838 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA4P12838 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA4P12838 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 AC090114.2-201ENST00000608477 7054 ntBASIC12.14□□□□□ -0.47
DEFA4P12838 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
DEFA4P12838 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA4P12838 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA4P12838 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
DEFA4P12838 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA4P12838 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.14□□□□□ -0.47
DEFA4P12838 AC004066.1-201ENST00000502488 802 ntBASIC12.14□□□□□ -0.47
DEFA4P12838 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.14□□□□□ -0.47
DEFA4P12838 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 AC092337.1-201ENST00000568699 1129 ntBASIC12.14□□□□□ -0.47
DEFA4P12838 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA4P12838 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.14□□□□□ -0.47
DEFA4P12838 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
DEFA4P12838 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA4P12838 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
DEFA4P12838 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA4P12838 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA4P12838 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA4P12838 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA4P12838 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.13□□□□□ -0.47
DEFA4P12838 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.13□□□□□ -0.47
DEFA4P12838 BEND3P1-201ENST00000421591 1944 ntBASIC12.13□□□□□ -0.47
DEFA4P12838 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
DEFA4P12838 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 AC152010.1-201ENST00000415779 2006 ntBASIC12.13□□□□□ -0.47
DEFA4P12838 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
DEFA4P12838 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.13□□□□□ -0.47
DEFA4P12838 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DEFA4P12838 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms