Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 AC244452.3-201ENST00000636814 210 ntBASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 AC007292.2-201ENST00000593524 1812 ntBASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCNYL3P0C7X3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 KRT8P14-201ENST00000414254 1442 ntBASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AC007969.1-201ENST00000433675 447 ntBASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AC022616.1-201ENST00000518688 554 ntBASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 SAMD11P1-201ENST00000571429 661 ntBASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AL137246.1-201ENST00000607072 977 ntBASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 AC079781.5-202ENST00000641784 3743 ntBASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 LINC01101-201ENST00000622953 1884 ntBASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCNYL3P0C7X3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 AC015656.1-201ENST00000624209 3578 ntBASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCNYL3P0C7X3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms