Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 AC013726.1-201ENST00000563747 2285 ntBASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 RN7SL11P-201ENST00000471305 293 ntBASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 CHMP4BP1-201ENST00000556017 588 ntBASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 AC105129.2-201ENST00000559536 390 ntBASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAB40ALP0C0E4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB40ALP0C0E4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
RAB40ALP0C0E4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
RAB40ALP0C0E4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB40ALP0C0E4 AP000845.1-201ENST00000581677 2131 ntBASIC13.96□□□□□ -0.18
RAB40ALP0C0E4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB40ALP0C0E4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RAB40ALP0C0E4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 SBF1P1-201ENST00000444527 5631 ntBASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AC112693.3-201ENST00000624819 1983 ntBASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 RPL18P13-201ENST00000478088 569 ntBASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 RN7SL720P-201ENST00000488178 304 ntBASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AC125604.1-201ENST00000496255 707 ntBASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AL161670.2-201ENST00000557650 1227 ntBASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AC009884.2-201ENST00000603110 324 ntBASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AL132994.2-201ENST00000603120 687 ntBASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms