Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 FDX1P1-201ENST00000449115 551 ntBASIC16.67■□□□□ 0.26
TPM3P06753 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 RN7SL618P-201ENST00000477850 296 ntBASIC16.67■□□□□ 0.26
TPM3P06753 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.67■□□□□ 0.26
TPM3P06753 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.67■□□□□ 0.26
TPM3P06753 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.67■□□□□ 0.26
TPM3P06753 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TPM3P06753 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TPM3P06753 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.66■□□□□ 0.26
TPM3P06753 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TPM3P06753 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.66■□□□□ 0.26
TPM3P06753 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.66■□□□□ 0.26
TPM3P06753 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TPM3P06753 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TPM3P06753 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.66■□□□□ 0.26
TPM3P06753 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.66■□□□□ 0.26
TPM3P06753 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM3P06753 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 AC083964.2-201ENST00000623988 2396 ntBASIC16.65■□□□□ 0.26
TPM3P06753 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.65■□□□□ 0.26
TPM3P06753 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.65■□□□□ 0.26
TPM3P06753 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TPM3P06753 DNAJB3-201ENST00000446806 729 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms