Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.82■□□□□ 0.12
ATP1A1P05023 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATP1A1P05023 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.82■□□□□ 0.12
ATP1A1P05023 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ATP1A1P05023 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1A1P05023 NUTM2HP-201ENST00000442076 2498 ntBASIC15.82■□□□□ 0.12
ATP1A1P05023 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
ATP1A1P05023 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ATP1A1P05023 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP1A1P05023 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ATP1A1P05023 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
ATP1A1P05023 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP1A1P05023 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP1A1P05023 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP1A1P05023 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP1A1P05023 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP1A1P05023 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP1A1P05023 AC002472.2-201ENST00000442739 958 ntBASIC15.81■□□□□ 0.12
ATP1A1P05023 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP1A1P05023 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.81■□□□□ 0.12
ATP1A1P05023 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ATP1A1P05023 HSPA8P5-201ENST00000456928 2069 ntBASIC15.81■□□□□ 0.12
ATP1A1P05023 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP1A1P05023 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP1A1P05023 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ATP1A1P05023 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP1A1P05023 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP1A1P05023 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATP1A1P05023 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP1A1P05023 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP1A1P05023 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.81■□□□□ 0.12
ATP1A1P05023 AC004840.1-201ENST00000636359 365 ntBASIC15.81■□□□□ 0.12
ATP1A1P05023 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1A1P05023 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ATP1A1P05023 AC020658.7-201ENST00000624274 2442 ntBASIC15.8■□□□□ 0.12
ATP1A1P05023 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ATP1A1P05023 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
ATP1A1P05023 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP1A1P05023 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 AC073548.1-201ENST00000624088 1882 ntBASIC15.8■□□□□ 0.12
ATP1A1P05023 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP1A1P05023 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 AC011840.2-201ENST00000563063 1520 ntBASIC15.8■□□□□ 0.12
ATP1A1P05023 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1A1P05023 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1A1P05023 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.8■□□□□ 0.12
ATP1A1P05023 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.8■□□□□ 0.12
ATP1A1P05023 SERBP1P5-201ENST00000510079 1181 ntBASIC15.8■□□□□ 0.12
ATP1A1P05023 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.8■□□□□ 0.12
ATP1A1P05023 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.8■□□□□ 0.12
ATP1A1P05023 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP1A1P05023 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.8■□□□□ 0.12
ATP1A1P05023 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.8■□□□□ 0.12
ATP1A1P05023 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 LINC02560-201ENST00000596379 459 ntBASIC15.8■□□□□ 0.12
ATP1A1P05023 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP1A1P05023 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP1A1P05023 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1A1P05023 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
ATP1A1P05023 AGAP10P-201ENST00000454844 2418 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms