Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
CHRNA1P02708 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
CHRNA1P02708 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA1P02708 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA1P02708 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.94■□□□□ 0.14
CHRNA1P02708 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.94■□□□□ 0.14
CHRNA1P02708 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA1P02708 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA1P02708 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 AC013268.4-201ENST00000637413 2228 ntBASIC15.94■□□□□ 0.14
CHRNA1P02708 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.94■□□□□ 0.14
CHRNA1P02708 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.94■□□□□ 0.14
CHRNA1P02708 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CHRNA1P02708 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CHRNA1P02708 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.94■□□□□ 0.14
CHRNA1P02708 AL627422.1-201ENST00000434104 580 ntBASIC15.94■□□□□ 0.14
CHRNA1P02708 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CHRNA1P02708 AC114947.1-202ENST00000514136 344 ntBASIC15.94■□□□□ 0.14
CHRNA1P02708 AC007326.1-201ENST00000604539 458 ntBASIC15.94■□□□□ 0.14
CHRNA1P02708 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.94■□□□□ 0.14
CHRNA1P02708 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CHRNA1P02708 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA1P02708 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA1P02708 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CHRNA1P02708 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA1P02708 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 AC073347.1-201ENST00000421633 2643 ntBASIC15.94■□□□□ 0.14
CHRNA1P02708 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CHRNA1P02708 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.94■□□□□ 0.14
CHRNA1P02708 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 AC015688.4-201ENST00000580780 1647 ntBASIC15.94■□□□□ 0.14
CHRNA1P02708 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHRNA1P02708 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.94■□□□□ 0.14
CHRNA1P02708 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
CHRNA1P02708 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CHRNA1P02708 AGAP7P-201ENST00000582299 2062 ntBASIC15.93■□□□□ 0.14
CHRNA1P02708 AGAP14-201ENST00000624701 2060 ntBASIC15.93■□□□□ 0.14
CHRNA1P02708 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CHRNA1P02708 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA1P02708 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.93■□□□□ 0.14
CHRNA1P02708 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA1P02708 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 RN7SL530P-201ENST00000485097 298 ntBASIC15.93■□□□□ 0.14
CHRNA1P02708 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRNA1P02708 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.93■□□□□ 0.14
CHRNA1P02708 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.93■□□□□ 0.14
CHRNA1P02708 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.93■□□□□ 0.14
CHRNA1P02708 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CHRNA1P02708 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA1P02708 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRNA1P02708 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CHRNA1P02708 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRNA1P02708 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRNA1P02708 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CHRNA1P02708 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA1P02708 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CHRNA1P02708 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA1P02708 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA1P02708 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.93■□□□□ 0.14
CHRNA1P02708 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRNA1P02708 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRNA1P02708 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms