Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDRT1O95170 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 PCDHA5-203ENST00000614258 4248 ntBASIC13.28□□□□□ -0.28
CDRT1O95170 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CDRT1O95170 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CDRT1O95170 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CDRT1O95170 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CDRT1O95170 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 GPS2P2-201ENST00000430745 888 ntBASIC13.28□□□□□ -0.28
CDRT1O95170 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 SPDYE14P-201ENST00000442619 822 ntBASIC13.28□□□□□ -0.28
CDRT1O95170 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CDRT1O95170 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.28□□□□□ -0.28
CDRT1O95170 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.28□□□□□ -0.28
CDRT1O95170 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
CDRT1O95170 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 AC026150.2-201ENST00000564693 1156 ntBASIC13.28□□□□□ -0.28
CDRT1O95170 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.28□□□□□ -0.28
CDRT1O95170 AC007967.4-201ENST00000614700 386 ntBASIC13.28□□□□□ -0.28
CDRT1O95170 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.28□□□□□ -0.28
CDRT1O95170 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.28□□□□□ -0.28
CDRT1O95170 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CDRT1O95170 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CDRT1O95170 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
CDRT1O95170 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDRT1O95170 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDRT1O95170 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CDRT1O95170 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.27□□□□□ -0.28
CDRT1O95170 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.27□□□□□ -0.28
CDRT1O95170 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.27□□□□□ -0.28
CDRT1O95170 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.27□□□□□ -0.28
CDRT1O95170 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDRT1O95170 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.27□□□□□ -0.28
CDRT1O95170 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.28
CDRT1O95170 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.27□□□□□ -0.28
CDRT1O95170 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDRT1O95170 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDRT1O95170 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDRT1O95170 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CDRT1O95170 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDRT1O95170 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
CDRT1O95170 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.27□□□□□ -0.29
CDRT1O95170 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.27□□□□□ -0.29
CDRT1O95170 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.27□□□□□ -0.29
CDRT1O95170 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDRT1O95170 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.27□□□□□ -0.29
CDRT1O95170 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.27□□□□□ -0.29
CDRT1O95170 SAMD11P1-201ENST00000571429 661 ntBASIC13.27□□□□□ -0.29
CDRT1O95170 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDRT1O95170 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.27□□□□□ -0.29
CDRT1O95170 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.27□□□□□ -0.29
CDRT1O95170 MIR4453-201ENST00000584019 89 ntBASIC13.27□□□□□ -0.29
CDRT1O95170 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.27□□□□□ -0.29
CDRT1O95170 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.27□□□□□ -0.29
CDRT1O95170 AC074044.1-201ENST00000609673 707 ntBASIC13.27□□□□□ -0.29
CDRT1O95170 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CDRT1O95170 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.27□□□□□ -0.29
CDRT1O95170 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDRT1O95170 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms