Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 AL596257.1-201ENST00000641463 2694 ntBASIC16.66■□□□□ 0.26
CHMP2AO43633 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHMP2AO43633 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 MRPL37P1-201ENST00000592451 1337 ntBASIC16.66■□□□□ 0.26
CHMP2AO43633 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHMP2AO43633 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP2AO43633 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP2AO43633 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP2AO43633 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHMP2AO43633 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHMP2AO43633 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP2AO43633 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP2AO43633 PUDPP3-201ENST00000445368 636 ntBASIC16.65■□□□□ 0.26
CHMP2AO43633 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 AC021723.1-201ENST00000486306 515 ntBASIC16.65■□□□□ 0.26
CHMP2AO43633 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP2AO43633 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHMP2AO43633 MIR4783-201ENST00000580343 82 ntBASIC16.65■□□□□ 0.26
CHMP2AO43633 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CHMP2AO43633 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP2AO43633 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 AL008638.5-201ENST00000623814 1298 ntBASIC16.65■□□□□ 0.26
CHMP2AO43633 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP2AO43633 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
CHMP2AO43633 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP2AO43633 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP2AO43633 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP2AO43633 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP2AO43633 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHMP2AO43633 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP2AO43633 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHMP2AO43633 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.64■□□□□ 0.26
CHMP2AO43633 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP2AO43633 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP2AO43633 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP2AO43633 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CHMP2AO43633 AC010141.1-201ENST00000411585 623 ntBASIC16.64■□□□□ 0.25
CHMP2AO43633 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP2AO43633 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP2AO43633 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 FAM8A2P-201ENST00000528813 1142 ntBASIC16.64■□□□□ 0.25
CHMP2AO43633 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP2AO43633 AC100827.2-201ENST00000563214 1194 ntBASIC16.64■□□□□ 0.25
CHMP2AO43633 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP2AO43633 AC009955.4-201ENST00000597192 544 ntBASIC16.64■□□□□ 0.25
CHMP2AO43633 AC007663.3-201ENST00000609632 465 ntBASIC16.64■□□□□ 0.25
CHMP2AO43633 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CHMP2AO43633 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP2AO43633 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP2AO43633 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CHMP2AO43633 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP2AO43633 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHMP2AO43633 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP2AO43633 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms