Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHL1O00533 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHL1O00533 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.79■□□□□ 0.6
CHL1O00533 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.79■□□□□ 0.6
CHL1O00533 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHL1O00533 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.79■□□□□ 0.6
CHL1O00533 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CHL1O00533 AC090386.2-201ENST00000623010 1039 ntBASIC18.79■□□□□ 0.6
CHL1O00533 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.79■□□□□ 0.6
CHL1O00533 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CHL1O00533 AP002353.1-201ENST00000528257 1599 ntBASIC18.79■□□□□ 0.6
CHL1O00533 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.79■□□□□ 0.6
CHL1O00533 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.79■□□□□ 0.6
CHL1O00533 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.79■□□□□ 0.6
CHL1O00533 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHL1O00533 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHL1O00533 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.78■□□□□ 0.6
CHL1O00533 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.78■□□□□ 0.6
CHL1O00533 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.78■□□□□ 0.6
CHL1O00533 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.78■□□□□ 0.6
CHL1O00533 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.78■□□□□ 0.6
CHL1O00533 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.78■□□□□ 0.6
CHL1O00533 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.78■□□□□ 0.6
CHL1O00533 AC073150.1-201ENST00000450406 1084 ntBASIC18.78■□□□□ 0.6
CHL1O00533 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.78■□□□□ 0.6
CHL1O00533 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.78■□□□□ 0.6
CHL1O00533 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.78■□□□□ 0.6
CHL1O00533 AC091812.3-201ENST00000621362 345 ntBASIC18.78■□□□□ 0.6
CHL1O00533 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.78■□□□□ 0.6
CHL1O00533 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHL1O00533 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHL1O00533 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHL1O00533 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.78■□□□□ 0.6
CHL1O00533 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHL1O00533 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.77■□□□□ 0.6
CHL1O00533 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.77■□□□□ 0.6
CHL1O00533 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHL1O00533 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHL1O00533 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHL1O00533 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.77■□□□□ 0.6
CHL1O00533 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHL1O00533 TSPY25P-201ENST00000429463 745 ntBASIC18.77■□□□□ 0.6
CHL1O00533 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.77■□□□□ 0.6
CHL1O00533 AC092580.1-201ENST00000433998 658 ntBASIC18.77■□□□□ 0.6
CHL1O00533 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.77■□□□□ 0.6
CHL1O00533 Z97180.1-201ENST00000445173 988 ntBASIC18.77■□□□□ 0.6
CHL1O00533 AC006335.1-201ENST00000445200 547 ntBASIC18.77■□□□□ 0.6
CHL1O00533 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHL1O00533 NUP210P1-202ENST00000504322 710 ntBASIC18.77■□□□□ 0.6
CHL1O00533 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.77■□□□□ 0.6
CHL1O00533 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.77■□□□□ 0.6
CHL1O00533 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHL1O00533 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.77■□□□□ 0.6
CHL1O00533 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHL1O00533 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHL1O00533 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHL1O00533 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHL1O00533 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHL1O00533 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.77■□□□□ 0.6
CHL1O00533 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC18.77■□□□□ 0.59
CHL1O00533 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHL1O00533 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHL1O00533 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHL1O00533 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.76■□□□□ 0.59
CHL1O00533 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.76■□□□□ 0.59
CHL1O00533 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHL1O00533 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHL1O00533 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms