Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AC127383.1-201ENST00000444697 1800 ntBASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AC131009.4-201ENST00000624048 1740 ntBASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AMT-224ENST00000635808 1610 ntTSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 ZBTB45P2-201ENST00000452245 1531 ntBASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 LGALS8-AS1-201ENST00000487567 1457 ntBASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 COL14A1-202ENST00000297848 6466 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 DPM2-202ENST00000373110 738 ntTSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 TMEM198B-204ENST00000484016 896 ntBASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AL136038.4-201ENST00000603606 1261 ntBASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AC080038.1-201ENST00000611274 1154 ntBASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 DECR2-212ENST00000627716 352 ntTSL 2 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 AC018445.4-201ENST00000624066 2291 ntBASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 HAPLN1-201ENST00000274341 5607 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHKB-CPT1BH3BT56 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 AP001267.2-201ENST00000532619 2086 ntBASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 DDX12P-201ENST00000432996 2947 ntBASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
CHKB-CPT1BH3BT56 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AP001282.1-201ENST00000531301 1499 ntBASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms