Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 KLF2P4-201ENST00000451959 1225 ntBASIC15.12■□□□□ 0.01
CAPN8A6NHC0 FO681548.1-201ENST00000455617 1132 ntBASIC15.12■□□□□ 0.01
CAPN8A6NHC0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 AC138951.2-201ENST00000623455 1161 ntBASIC15.12■□□□□ 0.01
CAPN8A6NHC0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 SBF1P1-201ENST00000444527 5631 ntBASIC15.12■□□□□ 0.01
CAPN8A6NHC0 ST20-AS1-201ENST00000560255 4223 ntBASIC15.12■□□□□ 0.01
CAPN8A6NHC0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN8A6NHC0 AC005252.3-201ENST00000623855 2258 ntBASIC15.12■□□□□ 0.01
CAPN8A6NHC0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 MIR600HG-201ENST00000449175 5984 ntBASIC15.11■□□□□ 0.01
CAPN8A6NHC0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 ANKRD19P-201ENST00000338192 862 ntBASIC15.11■□□□□ 0.01
CAPN8A6NHC0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 CTBP2P5-201ENST00000454986 1264 ntBASIC15.11■□□□□ 0.01
CAPN8A6NHC0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 AC078819.1-201ENST00000547454 765 ntBASIC15.11■□□□□ 0.01
CAPN8A6NHC0 AC012085.1-201ENST00000548270 765 ntBASIC15.11■□□□□ 0.01
CAPN8A6NHC0 SNX29P1-201ENST00000548357 1007 ntBASIC15.11■□□□□ 0.01
CAPN8A6NHC0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 RHOQP1-201ENST00000555758 579 ntBASIC15.11■□□□□ 0.01
CAPN8A6NHC0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 RHOXF1P1-202ENST00000635473 501 ntBASIC15.11■□□□□ 0.01
CAPN8A6NHC0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN8A6NHC0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 OR2I1P-209ENST00000641730 5365 ntBASIC15.1■□□□□ 0.01
CAPN8A6NHC0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 CD8B2-202ENST00000417670 633 ntBASIC15.1■□□□□ 0.01
CAPN8A6NHC0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN8A6NHC0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms