Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 GCOM2-201ENST00000509133 1104 ntBASIC10.42□□□□□ -0.74
LINC01546A6NGU7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 AC104506.1-201ENST00000609247 429 ntBASIC10.42□□□□□ -0.74
LINC01546A6NGU7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 AP001972.5-201ENST00000624624 2338 ntBASIC10.42□□□□□ -0.74
LINC01546A6NGU7 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 AC110048.1-201ENST00000604293 2157 ntBASIC10.42□□□□□ -0.74
LINC01546A6NGU7 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01546A6NGU7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 AL928654.5-201ENST00000624831 2501 ntBASIC10.41□□□□□ -0.74
LINC01546A6NGU7 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 AC073869.1-201ENST00000415574 2762 ntBASIC10.41□□□□□ -0.74
LINC01546A6NGU7 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 SLC25A6P4-201ENST00000586535 553 ntBASIC10.41□□□□□ -0.74
LINC01546A6NGU7 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 AC004461.2-201ENST00000629517 803 ntBASIC10.41□□□□□ -0.74
LINC01546A6NGU7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01546A6NGU7 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 MIR497HG-202ENST00000572453 3838 ntBASIC10.4□□□□□ -0.74
LINC01546A6NGU7 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms