Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CR382287.1-201ENST00000623954 586 ntBASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 LINC00552-201ENST00000625151 2579 ntBASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB13Q9Y5F0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB13Q9Y5F0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHB13Q9Y5F0 MTHFR-210ENST00000641407 2387 ntBASIC16.58■□□□□ 0.25
PCDHB13Q9Y5F0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB13Q9Y5F0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHB13Q9Y5F0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB13Q9Y5F0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
PCDHB13Q9Y5F0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHB13Q9Y5F0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 AC122713.1-201ENST00000518368 1015 ntBASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 GNRHR2-203ENST00000581100 1187 ntBASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
PCDHB13Q9Y5F0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 AL390755.1-201ENST00000623716 2027 ntBASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 TPM3P8-201ENST00000330554 643 ntBASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 TLE1P1-201ENST00000422965 589 ntBASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 KRT43P-201ENST00000434019 910 ntBASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 AC016694.1-201ENST00000434179 700 ntBASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 MTND4LP31-201ENST00000514859 294 ntBASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB13Q9Y5F0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms