Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 AC136604.1-201ENST00000418535 575 ntBASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 MCCD1P2-201ENST00000423228 335 ntBASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 RHOQP3-201ENST00000437982 621 ntBASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 AC023141.13-201ENST00000604991 943 ntBASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRCH1Q9Y2L9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 TRIM80P-201ENST00000455685 2848 ntBASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 AC104457.1-201ENST00000401024 814 ntBASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 AC136604.1-202ENST00000425471 771 ntBASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 PDPK2P-202ENST00000562415 1191 ntBASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 AC018845.2-201ENST00000568326 409 ntBASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 AL445209.1-201ENST00000607269 3491 ntBASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRCH1Q9Y2L9 BCAR1-209ENST00000546196 1340 ntBASIC14.15□□□□□ -0.15
LRCH1Q9Y2L9 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
LRCH1Q9Y2L9 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.14□□□□□ -0.15
LRCH1Q9Y2L9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms