Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 MTHFR-210ENST00000641407 2387 ntBASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 KRT8P18-201ENST00000413425 1445 ntBASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 AC025183.3-201ENST00000623526 1482 ntBASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 Z69890.1-201ENST00000382990 339 ntBASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 RN7SL788P-201ENST00000460504 316 ntBASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 RN7SL455P-201ENST00000580629 282 ntBASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 HKR1-225ENST00000592168 566 ntTSL 4 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHANK2Q9UPX8 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 LINC00554-201ENST00000564841 3011 ntBASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 KRT8P43-201ENST00000406052 1458 ntBASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHANK2Q9UPX8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 CICP14-201ENST00000629111 2732 ntBASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 AC006987.1-201ENST00000413610 527 ntBASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 ACTBP7-201ENST00000418351 1124 ntBASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 AC025186.1-201ENST00000478174 870 ntBASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 AL021707.6-201ENST00000609212 491 ntBASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHANK2Q9UPX8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 AC011498.7-201ENST00000624986 2027 ntBASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 NHP2-202ENST00000314397 599 ntTSL 2 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms