Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 BOLA2P3-201ENST00000404566 256 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 MIR1202-201ENST00000408529 83 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 AC112492.5-201ENST00000421897 457 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 U91328.1-201ENST00000437528 223 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 RPL7P3-201ENST00000441388 714 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 COX5BP1-201ENST00000507622 393 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 ALG3P1-201ENST00000508806 1114 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 RN7SL713P-201ENST00000582127 302 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 AC073413.1-201ENST00000603927 732 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 AP001002.3-201ENST00000623482 206 ntBASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4E1Q9UPM8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 MIR4683-201ENST00000579659 81 ntBASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 AL512343.1-201ENST00000605837 169 ntBASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 AC002472.3-201ENST00000640124 621 ntBASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 AHCYP2-201ENST00000430630 1300 ntBASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4E1Q9UPM8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 MYADML-201ENST00000474610 2147 ntBASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4E1Q9UPM8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms