Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 AC089987.1-201ENST00000551654 2209 ntBASIC13.29□□□□□ -0.28
COPS3Q9UNS2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 DUX4L27-201ENST00000554796 1261 ntBASIC13.29□□□□□ -0.28
COPS3Q9UNS2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 RARRES2P5-201ENST00000564013 466 ntBASIC13.29□□□□□ -0.28
COPS3Q9UNS2 DUX4L47-201ENST00000566374 394 ntBASIC13.29□□□□□ -0.28
COPS3Q9UNS2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 AL359881.3-201ENST00000602640 1721 ntBASIC13.29□□□□□ -0.28
COPS3Q9UNS2 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 AC090505.1-201ENST00000430515 1834 ntBASIC13.29□□□□□ -0.28
COPS3Q9UNS2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
COPS3Q9UNS2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 AC104794.3-201ENST00000566840 1248 ntBASIC13.28□□□□□ -0.28
COPS3Q9UNS2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.28□□□□□ -0.28
COPS3Q9UNS2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms