Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 AC099548.2-209ENST00000480264 625 ntBASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 MIR4683-201ENST00000579659 81 ntBASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 AL022328.3-201ENST00000607943 679 ntBASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 WASH3P-207ENST00000560956 1394 ntBASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 OR2I1P-209ENST00000641730 5365 ntBASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 AC020910.5-201ENST00000623668 1865 ntBASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 AC005840.4-201ENST00000541242 2494 ntBASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 AC004945.1-201ENST00000416738 983 ntBASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 AC006033.1-201ENST00000440505 426 ntBASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 HIST2H2BB-201ENST00000449108 381 ntBASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 AP000593.2-201ENST00000542775 1433 ntBASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLIP2Q9UDT6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 MIR1247-201ENST00000408206 136 ntBASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 GPAA1P2-201ENST00000417923 928 ntBASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 AC079178.1-201ENST00000420915 656 ntBASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 HSPB1P2-201ENST00000448722 546 ntBASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 AC100850.1-201ENST00000506768 649 ntBASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 MIR3615-201ENST00000581999 87 ntBASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 AP001002.3-201ENST00000623482 206 ntBASIC17.59■□□□□ 0.41
CLIP2Q9UDT6 AL008638.5-201ENST00000623814 1298 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms