Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 RPL7P3-201ENST00000441388 714 ntBASIC13.03□□□□□ -0.32
CDH20Q9HBT6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 FTLP10-202ENST00000505798 471 ntBASIC13.03□□□□□ -0.32
CDH20Q9HBT6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 IGHV3-71-201ENST00000523324 359 ntBASIC13.03□□□□□ -0.32
CDH20Q9HBT6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 AC078819.1-201ENST00000547454 765 ntBASIC13.03□□□□□ -0.32
CDH20Q9HBT6 AC012085.1-201ENST00000548270 765 ntBASIC13.03□□□□□ -0.32
CDH20Q9HBT6 AC079316.1-201ENST00000548397 411 ntBASIC13.03□□□□□ -0.32
CDH20Q9HBT6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 AC017083.2-201ENST00000608069 979 ntBASIC13.03□□□□□ -0.32
CDH20Q9HBT6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
CDH20Q9HBT6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 POM121L8P-201ENST00000417732 1281 ntBASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 ARSEP1-201ENST00000420443 635 ntBASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 FAM8A4P-201ENST00000435433 1213 ntBASIC13.02□□□□□ -0.33
CDH20Q9HBT6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 POM121L9P-203ENST00000441984 1285 ntBASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AC004466.1-201ENST00000599515 1080 ntBASIC13.02□□□□□ -0.33
CDH20Q9HBT6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AC133552.6-201ENST00000613406 534 ntBASIC13.02□□□□□ -0.33
CDH20Q9HBT6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms