Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.22■□□□□ 0.03
SP110Q9HB58 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.22■□□□□ 0.03
SP110Q9HB58 AC002472.3-201ENST00000640124 621 ntBASIC15.22■□□□□ 0.03
SP110Q9HB58 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.22■□□□□ 0.03
SP110Q9HB58 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SP110Q9HB58 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.22■□□□□ 0.03
SP110Q9HB58 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 AC007292.2-201ENST00000593524 1812 ntBASIC15.22■□□□□ 0.03
SP110Q9HB58 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.22■□□□□ 0.03
SP110Q9HB58 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SP110Q9HB58 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 AC009093.2-202ENST00000620513 2079 ntBASIC15.21■□□□□ 0.03
SP110Q9HB58 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 MRPL37P1-201ENST00000592451 1337 ntBASIC15.21■□□□□ 0.03
SP110Q9HB58 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.21■□□□□ 0.03
SP110Q9HB58 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SP110Q9HB58 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.21■□□□□ 0.03
SP110Q9HB58 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 HLA-V-201ENST00000429037 534 ntBASIC15.21■□□□□ 0.03
SP110Q9HB58 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.21■□□□□ 0.03
SP110Q9HB58 GCOM2-201ENST00000509133 1104 ntBASIC15.21■□□□□ 0.03
SP110Q9HB58 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.21■□□□□ 0.03
SP110Q9HB58 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.21■□□□□ 0.03
SP110Q9HB58 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.21■□□□□ 0.03
SP110Q9HB58 AC073413.1-201ENST00000603927 732 ntBASIC15.21■□□□□ 0.03
SP110Q9HB58 AC008687.7-202ENST00000637404 953 ntBASIC15.21■□□□□ 0.03
SP110Q9HB58 COX11-210ENST00000639671 696 ntBASIC15.21■□□□□ 0.03
SP110Q9HB58 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.21■□□□□ 0.03
SP110Q9HB58 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.21■□□□□ 0.03
SP110Q9HB58 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP110Q9HB58 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.21■□□□□ 0.02
SP110Q9HB58 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SP110Q9HB58 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
SP110Q9HB58 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.21■□□□□ 0.02
SP110Q9HB58 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SP110Q9HB58 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SP110Q9HB58 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SP110Q9HB58 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SP110Q9HB58 KRT8P4-201ENST00000509735 1454 ntBASIC15.2■□□□□ 0.02
SP110Q9HB58 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP110Q9HB58 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.2■□□□□ 0.02
SP110Q9HB58 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.2■□□□□ 0.02
SP110Q9HB58 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.2■□□□□ 0.02
SP110Q9HB58 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP110Q9HB58 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.2■□□□□ 0.02
SP110Q9HB58 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
SP110Q9HB58 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.2■□□□□ 0.02
SP110Q9HB58 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
SP110Q9HB58 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.2■□□□□ 0.02
SP110Q9HB58 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
SP110Q9HB58 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SP110Q9HB58 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP110Q9HB58 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SP110Q9HB58 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP110Q9HB58 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP110Q9HB58 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP110Q9HB58 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.2■□□□□ 0.02
SP110Q9HB58 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SP110Q9HB58 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.2■□□□□ 0.02
SP110Q9HB58 AC099336.1-201ENST00000417053 1171 ntBASIC15.2■□□□□ 0.02
SP110Q9HB58 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.2■□□□□ 0.02
SP110Q9HB58 CNN2P10-201ENST00000443067 918 ntBASIC15.2■□□□□ 0.02
SP110Q9HB58 HOMER2P2-201ENST00000451621 847 ntBASIC15.2■□□□□ 0.02
SP110Q9HB58 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms