Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 MIR193BHG-211ENST00000641433 5365 ntBASIC18.28■□□□□ 0.52
UPF2Q9HAU5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 AC020910.6-201ENST00000623084 1459 ntBASIC18.27■□□□□ 0.52
UPF2Q9HAU5 TUBB3P1-201ENST00000405796 1332 ntBASIC18.27■□□□□ 0.52
UPF2Q9HAU5 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 TMEM198B-204ENST00000484016 896 ntBASIC18.27■□□□□ 0.52
UPF2Q9HAU5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
UPF2Q9HAU5 TCAF1P1-201ENST00000414990 2232 ntBASIC18.27■□□□□ 0.52
UPF2Q9HAU5 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC18.27■□□□□ 0.51
UPF2Q9HAU5 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 GAPDHP40-201ENST00000505218 1006 ntBASIC18.26■□□□□ 0.51
UPF2Q9HAU5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 AL512356.2-201ENST00000546955 174 ntBASIC18.26■□□□□ 0.51
UPF2Q9HAU5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF2Q9HAU5 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms