Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 ERP29P1-201ENST00000442902 706 ntBASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 RN7SL665P-201ENST00000578793 300 ntBASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 AC140113.1-201ENST00000603467 169 ntBASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 AC006158.1-201ENST00000610661 249 ntBASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 AC006504.5-208ENST00000588784 2401 ntBASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 OR8T1P-201ENST00000421347 918 ntBASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 GCSHP3-201ENST00000431120 391 ntBASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 RPL35P9-201ENST00000446059 350 ntBASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 AC068867.1-201ENST00000559855 150 ntBASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 AC244250.3-201ENST00000620749 366 ntBASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 AL591471.1-201ENST00000621855 229 ntBASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTFDC1Q9BY42 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.67■□□□□ 0.42
RTFDC1Q9BY42 AC024293.1-201ENST00000467930 498 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms