Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ARID3AQ99856 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ARID3AQ99856 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.04■□□□□ 0.32
ARID3AQ99856 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.04■□□□□ 0.32
ARID3AQ99856 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.04■□□□□ 0.32
ARID3AQ99856 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.04■□□□□ 0.32
ARID3AQ99856 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC17.04■□□□□ 0.32
ARID3AQ99856 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
ARID3AQ99856 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.04■□□□□ 0.32
ARID3AQ99856 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.04■□□□□ 0.32
ARID3AQ99856 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.04■□□□□ 0.32
ARID3AQ99856 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.04■□□□□ 0.32
ARID3AQ99856 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.04■□□□□ 0.32
ARID3AQ99856 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ARID3AQ99856 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ARID3AQ99856 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC17.04■□□□□ 0.32
ARID3AQ99856 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.04■□□□□ 0.32
ARID3AQ99856 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARID3AQ99856 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC17.03■□□□□ 0.32
ARID3AQ99856 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC17.03■□□□□ 0.32
ARID3AQ99856 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARID3AQ99856 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ARID3AQ99856 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARID3AQ99856 AL607033.1-201ENST00000623900 1599 ntBASIC17.03■□□□□ 0.32
ARID3AQ99856 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARID3AQ99856 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.03■□□□□ 0.32
ARID3AQ99856 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.03■□□□□ 0.32
ARID3AQ99856 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.03■□□□□ 0.32
ARID3AQ99856 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.03■□□□□ 0.32
ARID3AQ99856 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.03■□□□□ 0.32
ARID3AQ99856 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ARID3AQ99856 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.03■□□□□ 0.32
ARID3AQ99856 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARID3AQ99856 AL158211.3-201ENST00000607385 239 ntBASIC17.03■□□□□ 0.32
ARID3AQ99856 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
ARID3AQ99856 AL033527.5-202ENST00000641632 1098 ntBASIC17.03■□□□□ 0.32
ARID3AQ99856 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.03■□□□□ 0.32
ARID3AQ99856 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.03■□□□□ 0.32
ARID3AQ99856 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.03■□□□□ 0.32
ARID3AQ99856 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ARID3AQ99856 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARID3AQ99856 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARID3AQ99856 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ARID3AQ99856 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.03■□□□□ 0.32
ARID3AQ99856 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARID3AQ99856 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARID3AQ99856 AC100757.3-201ENST00000622361 1406 ntBASIC17.03■□□□□ 0.32
ARID3AQ99856 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC17.03■□□□□ 0.32
ARID3AQ99856 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARID3AQ99856 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
ARID3AQ99856 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC17.03■□□□□ 0.32
ARID3AQ99856 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.03■□□□□ 0.32
ARID3AQ99856 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ARID3AQ99856 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.02■□□□□ 0.32
ARID3AQ99856 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC17.02■□□□□ 0.32
ARID3AQ99856 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ARID3AQ99856 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.02■□□□□ 0.32
ARID3AQ99856 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.02■□□□□ 0.32
ARID3AQ99856 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.02■□□□□ 0.32
ARID3AQ99856 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ARID3AQ99856 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARID3AQ99856 AC010336.2-201ENST00000564226 506 ntBASIC17.02■□□□□ 0.32
ARID3AQ99856 AC005498.2-205ENST00000593218 784 ntBASIC17.02■□□□□ 0.32
ARID3AQ99856 AL844908.2-201ENST00000609461 460 ntBASIC17.02■□□□□ 0.32
ARID3AQ99856 AL390754.1-201ENST00000619088 582 ntBASIC17.02■□□□□ 0.32
ARID3AQ99856 AL365181.3-201ENST00000605886 3222 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms