Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 MYADML-201ENST00000474610 2147 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 KHSRPP1-201ENST00000427983 1768 ntBASIC12.3□□□□□ -0.44
GAFA1Q96PS6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 BX640514.1-201ENST00000583223 1918 ntBASIC12.3□□□□□ -0.44
GAFA1Q96PS6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 AC006504.5-208ENST00000588784 2401 ntBASIC12.3□□□□□ -0.44
GAFA1Q96PS6 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.3□□□□□ -0.44
GAFA1Q96PS6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 E2F3P2-201ENST00000447755 1422 ntBASIC12.29□□□□□ -0.44
GAFA1Q96PS6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 AL359881.2-201ENST00000602973 570 ntBASIC12.29□□□□□ -0.44
GAFA1Q96PS6 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.29□□□□□ -0.44
GAFA1Q96PS6 AC244157.2-201ENST00000616239 1006 ntBASIC12.29□□□□□ -0.44
GAFA1Q96PS6 AC027601.3-201ENST00000622907 509 ntBASIC12.29□□□□□ -0.44
GAFA1Q96PS6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms