Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 TIMM8BP1-201ENST00000452384 211 ntBASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CLPTM1LQ96KA5 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 AC215219.1-201ENST00000400706 1817 ntBASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLPTM1LQ96KA5 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AL662844.1-201ENST00000546340 181 ntBASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AP001005.1-201ENST00000571755 1248 ntBASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AC025048.3-201ENST00000590609 569 ntBASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 RN7SL828P-201ENST00000607615 303 ntBASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AC005702.4-201ENST00000618393 416 ntBASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 LINC00628-201ENST00000628516 1289 ntBASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AGAP12P-201ENST00000585227 2359 ntBASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 PCDHA6-201ENST00000378126 3267 ntBASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 NCLP1-201ENST00000445357 1963 ntBASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPTM1LQ96KA5 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLPTM1LQ96KA5 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms