Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 AC098934.1-203ENST00000442868 1262 ntBASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 RN7SL564P-201ENST00000496309 250 ntBASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 AGGF1P1-201ENST00000509500 2073 ntBASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 AC139712.1-201ENST00000378256 1875 ntBASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 LINC01101-201ENST00000622953 1884 ntBASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 RNVU1-8-201ENST00000364272 125 ntBASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 TRMT112P3-201ENST00000580149 358 ntBASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 AC006504.5-208ENST00000588784 2401 ntBASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 AL591122.2-201ENST00000624125 1853 ntBASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM43Q96BQ3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 PTGER4P2-201ENST00000328411 252 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms