Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 TCAF1P1-201ENST00000414990 2232 ntBASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 AC004466.1-201ENST00000599515 1080 ntBASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 MIR8072-201ENST00000614241 80 ntBASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC44A1Q8WWI5 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 SPDYE19P-201ENST00000338590 713 ntBASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 RN7SKP230-201ENST00000365642 335 ntBASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 AL442647.2-201ENST00000429864 857 ntBASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 AC055876.3-201ENST00000431496 288 ntBASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 AC103988.2-201ENST00000561804 725 ntBASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 AC138649.4-201ENST00000612222 287 ntBASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 AP001002.3-201ENST00000623482 206 ntBASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms