Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC107Q8WV48 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CCDC107Q8WV48 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC107Q8WV48 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC107Q8WV48 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC107Q8WV48 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AL356585.2-201ENST00000625078 2396 ntBASIC12.92□□□□□ -0.34
CCDC107Q8WV48 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AL133267.1-201ENST00000398220 340 ntBASIC12.92□□□□□ -0.34
CCDC107Q8WV48 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AC107890.1-201ENST00000422478 521 ntBASIC12.92□□□□□ -0.34
CCDC107Q8WV48 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AC044860.1-202ENST00000559481 777 ntBASIC12.92□□□□□ -0.34
CCDC107Q8WV48 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AC025181.2-201ENST00000606994 802 ntBASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AC074044.1-201ENST00000609673 707 ntBASIC12.92□□□□□ -0.34
CCDC107Q8WV48 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC107Q8WV48 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 COL6A4P2-202ENST00000504443 2753 ntBASIC12.91□□□□□ -0.34
CCDC107Q8WV48 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.91□□□□□ -0.34
CCDC107Q8WV48 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 RPL13P2-201ENST00000440687 659 ntBASIC12.91□□□□□ -0.34
CCDC107Q8WV48 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.91□□□□□ -0.34
CCDC107Q8WV48 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 AC093028.1-201ENST00000622998 982 ntBASIC12.91□□□□□ -0.34
CCDC107Q8WV48 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms