Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 AL162726.2-201ENST00000438986 1017 ntBASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 AC026434.2-201ENST00000506094 1078 ntBASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 REXO1L1P-201ENST00000379010 6598 ntBASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AC113367.3-201ENST00000508316 1912 ntBASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 GIMAP3P-201ENST00000495150 836 ntBASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AP001063.1-201ENST00000568332 529 ntBASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AC055811.4-201ENST00000624039 1754 ntBASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AC015656.1-201ENST00000624209 3578 ntBASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF439Q8NDP4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF439Q8NDP4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms