Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 AL157407.1-201ENST00000435784 904 ntBASIC15.02■□□□□ -0
SYNPOQ8N3V7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 MIR6769A-201ENST00000617340 73 ntBASIC15.02■□□□□ -0
SYNPOQ8N3V7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SYNPOQ8N3V7 AC003102.2-201ENST00000589195 1469 ntBASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 FRMPD2B-201ENST00000431305 1347 ntBASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 MIR3188-201ENST00000583494 85 ntBASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 LINC01783-202ENST00000614408 828 ntBASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 BX284668.2-205ENST00000619677 828 ntBASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 HLA-C-210ENST00000640219 976 ntBASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 AC136759.1-202ENST00000530858 2194 ntBASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.01□□□□□ -0.01
SYNPOQ8N3V7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms