Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 AP000354.1-201ENST00000396982 456 ntBASIC19.82■□□□□ 0.76
XRN1Q8IZH2 FAM21EP-201ENST00000417804 985 ntBASIC19.82■□□□□ 0.76
XRN1Q8IZH2 IFNWP2-201ENST00000431203 580 ntBASIC19.82■□□□□ 0.76
XRN1Q8IZH2 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 IGHEP1-201ENST00000521393 651 ntBASIC19.82■□□□□ 0.76
XRN1Q8IZH2 BATF-202ENST00000555504 361 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 AL591424.3-201ENST00000614278 872 ntBASIC19.82■□□□□ 0.76
XRN1Q8IZH2 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC19.82■□□□□ 0.76
XRN1Q8IZH2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 PPT1-215ENST00000641471 2368 ntBASIC19.82■□□□□ 0.76
XRN1Q8IZH2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 ABCD1P4-201ENST00000399687 604 ntBASIC19.82■□□□□ 0.76
XRN1Q8IZH2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 AC020904.3-201ENST00000624199 442 ntBASIC19.82■□□□□ 0.76
XRN1Q8IZH2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
XRN1Q8IZH2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 NQO2-204ENST00000380454 851 ntTSL 2 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 AC104961.1-201ENST00000427605 771 ntBASIC19.81■□□□□ 0.76
XRN1Q8IZH2 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRN1Q8IZH2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 AL080243.1-201ENST00000423293 1060 ntBASIC19.8■□□□□ 0.76
XRN1Q8IZH2 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 AC113347.2-201ENST00000512350 279 ntBASIC19.8■□□□□ 0.76
XRN1Q8IZH2 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 ANKRD26P1-203ENST00000569528 966 ntBASIC19.8■□□□□ 0.76
XRN1Q8IZH2 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms