Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 AC006504.5-208ENST00000588784 2401 ntBASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 PIN1P1-201ENST00000412108 996 ntBASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 FO681548.1-201ENST00000455617 1132 ntBASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 AC093433.1-201ENST00000458048 571 ntBASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 ENPP7P5-201ENST00000541031 1031 ntBASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 MSTO2P-201ENST00000314835 1709 ntBASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 AL928921.2-201ENST00000641325 2442 ntBASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 AL033527.5-201ENST00000641382 801 ntBASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 AL136172.1-201ENST00000598590 1394 ntBASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00346Q8IVM7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms