Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 AL008707.1-201ENST00000422498 534 ntBASIC16.49■□□□□ 0.23
TRIM50Q86XT4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 AL645933.1-201ENST00000440087 609 ntBASIC16.49■□□□□ 0.23
TRIM50Q86XT4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 AL132994.2-201ENST00000603120 687 ntBASIC16.49■□□□□ 0.23
TRIM50Q86XT4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 AL136295.7-201ENST00000619226 1200 ntBASIC16.49■□□□□ 0.23
TRIM50Q86XT4 AC027601.3-201ENST00000622907 509 ntBASIC16.49■□□□□ 0.23
TRIM50Q86XT4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 AL157791.1-201ENST00000553667 1699 ntBASIC16.49■□□□□ 0.23
TRIM50Q86XT4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AC006486.2-201ENST00000624246 2199 ntBASIC16.48■□□□□ 0.23
TRIM50Q86XT4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AL157407.1-201ENST00000435784 904 ntBASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AL596276.2-201ENST00000447525 331 ntBASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AC134698.3-201ENST00000523880 214 ntBASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AL133499.1-201ENST00000596207 608 ntBASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM50Q86XT4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AGAP7P-201ENST00000582299 2062 ntBASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AGAP14-201ENST00000624701 2060 ntBASIC16.47■□□□□ 0.23
TRIM50Q86XT4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms