Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 AC005730.2-201ENST00000564549 1184 ntBASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 MIR4525-201ENST00000580000 75 ntBASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 AL023803.2-201ENST00000620080 638 ntBASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 AL162426.1-201ENST00000624141 743 ntBASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRTM4Q86VH4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
LRRTM4Q86VH4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 TUBB8P8-201ENST00000458717 1058 ntBASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 MIR4783-201ENST00000580343 82 ntBASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRTM4Q86VH4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM4Q86VH4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms