Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC149Q6ZUS6 AC132872.4-202ENST00000622924 2756 ntBASIC15.52■□□□□ 0.07
CCDC149Q6ZUS6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC149Q6ZUS6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CCDC149Q6ZUS6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CCDC149Q6ZUS6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC149Q6ZUS6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC149Q6ZUS6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC149Q6ZUS6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 FAM90A2P-201ENST00000511144 1395 ntBASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 FAM90A25P-201ENST00000528404 1395 ntBASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 AL031713.1-201ENST00000564813 661 ntBASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 AC087045.2-201ENST00000606279 1003 ntBASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC149Q6ZUS6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 RPS9P1-201ENST00000419943 583 ntBASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 AC079112.1-201ENST00000454972 939 ntBASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 RN7SL67P-201ENST00000492147 296 ntBASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 AC008723.1-201ENST00000506922 207 ntBASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 AL157813.1-201ENST00000612996 587 ntBASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 AP001065.2-201ENST00000617205 644 ntBASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC149Q6ZUS6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms