Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 AC025279.2-201ENST00000569730 653 ntBASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 RN7SL48P-201ENST00000579283 293 ntBASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CICP8-201ENST00000455800 2813 ntBASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CU639417.3-201ENST00000624240 1404 ntBASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CLUHP2-201ENST00000426660 1303 ntBASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 AL512384.1-201ENST00000406683 331 ntBASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 AC245100.3-201ENST00000441281 285 ntBASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 AC011495.1-201ENST00000498085 584 ntBASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 AC008735.3-201ENST00000596646 500 ntBASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 ENPP7P14-201ENST00000621765 1040 ntBASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 AC105233.6-201ENST00000642093 218 ntBASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 AP001267.2-201ENST00000532619 2086 ntBASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NHLRC1Q6VVB1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms