Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 TERF1P3-201ENST00000505638 1227 ntBASIC13.07□□□□□ -0.32
C11orf88Q6PI97 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 AL356585.2-201ENST00000625078 2396 ntBASIC13.07□□□□□ -0.32
C11orf88Q6PI97 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.07□□□□□ -0.32
C11orf88Q6PI97 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 AC142381.1-201ENST00000426099 345 ntBASIC13.06□□□□□ -0.32
C11orf88Q6PI97 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 IGHV3-42-201ENST00000520410 361 ntBASIC13.06□□□□□ -0.32
C11orf88Q6PI97 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 AP001267.2-201ENST00000532619 2086 ntBASIC13.06□□□□□ -0.32
C11orf88Q6PI97 AC018529.2-202ENST00000611482 3087 ntBASIC13.06□□□□□ -0.32
C11orf88Q6PI97 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms